1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
|
use core::borrow::Borrow;
use std::convert::TryInto;
use std::sync::Arc;
use serde_bytes::ByteBuf;
use tokio::sync::Notify;
use garage_db as db;
use garage_db::counted_tree_hack::CountedTree;
use garage_util::data::*;
use garage_util::error::*;
use garage_util::migrate::Migrate;
use garage_rpc::system::System;
use crate::crdt::Crdt;
use crate::gc::GcTodoEntry;
use crate::metrics::*;
use crate::replication::*;
use crate::schema::*;
use crate::util::*;
pub struct TableData<F: TableSchema, R: TableReplication> {
system: Arc<System>,
pub instance: F,
pub replication: R,
pub store: db::Tree,
pub(crate) merkle_tree: db::Tree,
pub(crate) merkle_todo: db::Tree,
pub(crate) merkle_todo_notify: Notify,
pub(crate) insert_queue: db::Tree,
pub(crate) insert_queue_notify: Notify,
pub(crate) gc_todo: CountedTree,
pub(crate) metrics: TableMetrics,
}
impl<F: TableSchema, R: TableReplication> TableData<F, R> {
pub fn new(system: Arc<System>, instance: F, replication: R, db: &db::Db) -> Arc<Self> {
let store = db
.open_tree(&format!("{}:table", F::TABLE_NAME))
.expect("Unable to open DB tree");
let merkle_tree = db
.open_tree(&format!("{}:merkle_tree", F::TABLE_NAME))
.expect("Unable to open DB Merkle tree tree");
let merkle_todo = db
.open_tree(&format!("{}:merkle_todo", F::TABLE_NAME))
.expect("Unable to open DB Merkle TODO tree");
let insert_queue = db
.open_tree(&format!("{}:insert_queue", F::TABLE_NAME))
.expect("Unable to open insert queue DB tree");
let gc_todo = db
.open_tree(&format!("{}:gc_todo_v2", F::TABLE_NAME))
.expect("Unable to open GC DB tree");
let gc_todo = CountedTree::new(gc_todo).expect("Cannot count gc_todo_v2");
let metrics = TableMetrics::new(
F::TABLE_NAME,
store.clone(),
merkle_tree.clone(),
merkle_todo.clone(),
gc_todo.clone(),
);
Arc::new(Self {
system,
instance,
replication,
store,
merkle_tree,
merkle_todo,
merkle_todo_notify: Notify::new(),
insert_queue,
insert_queue_notify: Notify::new(),
gc_todo,
metrics,
})
}
// Read functions
pub fn read_entry(&self, p: &F::P, s: &F::S) -> Result<Option<ByteBuf>, Error> {
let tree_key = self.tree_key(p, s);
if let Some(bytes) = self.store.get(&tree_key)? {
Ok(Some(ByteBuf::from(bytes.to_vec())))
} else {
Ok(None)
}
}
pub fn read_range(
&self,
partition_key: &F::P,
start: &Option<F::S>,
filter: &Option<F::Filter>,
limit: usize,
enumeration_order: EnumerationOrder,
) -> Result<Vec<Arc<ByteBuf>>, Error> {
let partition_hash = partition_key.hash();
match enumeration_order {
EnumerationOrder::Forward => {
let first_key = match start {
None => partition_hash.to_vec(),
Some(sk) => self.tree_key(partition_key, sk),
};
let range = self.store.range(first_key..)?;
self.read_range_aux(partition_hash, range, filter, limit)
}
EnumerationOrder::Reverse => match start {
Some(sk) => {
let last_key = self.tree_key(partition_key, sk);
let range = self.store.range_rev(..=last_key)?;
self.read_range_aux(partition_hash, range, filter, limit)
}
None => {
let mut last_key = partition_hash.to_vec();
let lower = u128::from_be_bytes(last_key[16..32].try_into().unwrap());
last_key[16..32].copy_from_slice(&u128::to_be_bytes(lower + 1));
let range = self.store.range_rev(..last_key)?;
self.read_range_aux(partition_hash, range, filter, limit)
}
},
}
}
fn read_range_aux<'a>(
&self,
partition_hash: Hash,
range: db::ValueIter<'a>,
filter: &Option<F::Filter>,
limit: usize,
) -> Result<Vec<Arc<ByteBuf>>, Error> {
let mut ret = vec![];
for item in range {
let (key, value) = item?;
if &key[..32] != partition_hash.as_slice() {
break;
}
let keep = match filter {
None => true,
Some(f) => {
let entry = self.decode_entry(value.as_ref())?;
F::matches_filter(&entry, f)
}
};
if keep {
ret.push(Arc::new(ByteBuf::from(value)));
}
if ret.len() >= limit {
break;
}
}
Ok(ret)
}
// Mutation functions
// When changing this code, take care of propagating modifications correctly:
// - When an entry is modified or deleted, call the updated() function
// on the table instance
// - When an entry is modified or deleted, add it to the merkle updater's todo list.
// This has to be done atomically with the modification for the merkle updater
// to maintain consistency. The merkle updater must then be notified with todo_notify.
// - When an entry is updated to be a tombstone, add it to the gc_todo tree
pub(crate) fn update_many<T: Borrow<ByteBuf>>(&self, entries: &[T]) -> Result<(), Error> {
for update_bytes in entries.iter() {
self.update_entry(update_bytes.borrow().as_slice())?;
}
Ok(())
}
pub(crate) fn update_entry(&self, update_bytes: &[u8]) -> Result<(), Error> {
let update = self.decode_entry(update_bytes)?;
self.update_entry_with(update.partition_key(), update.sort_key(), |ent| match ent {
Some(mut ent) => {
ent.merge(&update);
ent
}
None => update.clone(),
})?;
Ok(())
}
pub fn update_entry_with(
&self,
partition_key: &F::P,
sort_key: &F::S,
f: impl Fn(Option<F::E>) -> F::E,
) -> Result<Option<F::E>, Error> {
let tree_key = self.tree_key(partition_key, sort_key);
let changed = self.store.db().transaction(|mut tx| {
let (old_entry, old_bytes, new_entry) = match tx.get(&self.store, &tree_key)? {
Some(old_bytes) => {
let old_entry = self.decode_entry(&old_bytes).map_err(db::TxError::Abort)?;
let new_entry = f(Some(old_entry.clone()));
(Some(old_entry), Some(old_bytes), new_entry)
}
None => (None, None, f(None)),
};
// Changed can be true in two scenarios
// Scenario 1: the actual represented value changed,
// so of course the messagepack encoding changed as well
// Scenario 2: the value didn't change but due to a migration in the
// data format, the messagepack encoding changed. In this case,
// we also have to write the migrated value in the table and update
// the associated Merkle tree entry.
let new_bytes = new_entry
.encode()
.map_err(Error::RmpEncode)
.map_err(db::TxError::Abort)?;
let changed = Some(&new_bytes[..]) != old_bytes.as_deref();
drop(old_bytes);
if changed {
let new_bytes_hash = blake2sum(&new_bytes);
tx.insert(&self.merkle_todo, &tree_key, new_bytes_hash.as_slice())?;
tx.insert(&self.store, &tree_key, new_bytes)?;
self.instance
.updated(&mut tx, old_entry.as_ref(), Some(&new_entry))?;
Ok(Some((new_entry, new_bytes_hash)))
} else {
Ok(None)
}
})?;
if let Some((new_entry, new_bytes_hash)) = changed {
self.metrics.internal_update_counter.add(1);
let is_tombstone = new_entry.is_tombstone();
self.merkle_todo_notify.notify_one();
if is_tombstone {
// We are only responsible for GC'ing this item if we are the
// "leader" of the partition, i.e. the first node in the
// set of nodes that replicates this partition.
// This avoids GC loops and does not change the termination properties
// of the GC algorithm, as in all cases GC is suspended if
// any node of the partition is unavailable.
let pk_hash = Hash::try_from(&tree_key[..32]).unwrap();
let nodes = self.replication.write_nodes(&pk_hash);
if nodes.first() == Some(&self.system.id) {
GcTodoEntry::new(tree_key, new_bytes_hash).save(&self.gc_todo)?;
}
}
Ok(Some(new_entry))
} else {
Ok(None)
}
}
pub(crate) fn delete_if_equal(self: &Arc<Self>, k: &[u8], v: &[u8]) -> Result<bool, Error> {
let removed = self
.store
.db()
.transaction(|mut tx| match tx.get(&self.store, k)? {
Some(cur_v) if cur_v == v => {
let old_entry = self.decode_entry(v).map_err(db::TxError::Abort)?;
tx.remove(&self.store, k)?;
tx.insert(&self.merkle_todo, k, vec![])?;
self.instance.updated(&mut tx, Some(&old_entry), None)?;
Ok(true)
}
_ => Ok(false),
})?;
if removed {
self.metrics.internal_delete_counter.add(1);
self.merkle_todo_notify.notify_one();
}
Ok(removed)
}
pub(crate) fn delete_if_equal_hash(
self: &Arc<Self>,
k: &[u8],
vhash: Hash,
) -> Result<bool, Error> {
let removed = self
.store
.db()
.transaction(|mut tx| match tx.get(&self.store, k)? {
Some(cur_v) if blake2sum(&cur_v[..]) == vhash => {
let old_entry = self.decode_entry(&cur_v[..]).map_err(db::TxError::Abort)?;
tx.remove(&self.store, k)?;
tx.insert(&self.merkle_todo, k, vec![])?;
self.instance.updated(&mut tx, Some(&old_entry), None)?;
Ok(true)
}
_ => Ok(false),
})?;
if removed {
self.metrics.internal_delete_counter.add(1);
self.merkle_todo_notify.notify_one();
}
Ok(removed)
}
// ---- Insert queue functions ----
pub(crate) fn queue_insert(
&self,
tx: &mut db::Transaction,
ins: &F::E,
) -> db::TxResult<(), Error> {
let tree_key = self.tree_key(ins.partition_key(), ins.sort_key());
let new_entry = match tx.get(&self.insert_queue, &tree_key)? {
Some(old_v) => {
let mut entry = self.decode_entry(&old_v).map_err(db::TxError::Abort)?;
entry.merge(ins);
entry.encode()
}
None => ins.encode(),
};
let new_entry = new_entry
.map_err(Error::RmpEncode)
.map_err(db::TxError::Abort)?;
tx.insert(&self.insert_queue, &tree_key, new_entry)?;
self.insert_queue_notify.notify_one();
Ok(())
}
// ---- Utility functions ----
pub fn tree_key(&self, p: &F::P, s: &F::S) -> Vec<u8> {
let mut ret = p.hash().to_vec();
ret.extend(s.sort_key());
ret
}
pub fn decode_entry(&self, bytes: &[u8]) -> Result<F::E, Error> {
match F::E::decode(bytes) {
Some(x) => Ok(x),
None => {
error!("Unable to decode entry of {}", F::TABLE_NAME);
for line in hexdump::hexdump_iter(bytes) {
debug!("{}", line);
}
Err(Error::Message(format!(
"Unable to decode entry of {}",
F::TABLE_NAME
)))
}
}
}
pub fn gc_todo_len(&self) -> Result<usize, Error> {
Ok(self.gc_todo.len())
}
}
|